.. _wfcommons-wfchef-label:

wfcommons.wfchef
================

.. toctree::
   :maxdepth: 4

wfcommons.wfchef.recipes.blast.recipe
-------------------------------------

.. automodule:: wfcommons.wfchef.recipes.blast.recipe
   :members:
   :undoc-members:
   :show-inheritance:

wfcommons.wfchef.recipes.bwa.recipe
-----------------------------------

.. automodule:: wfcommons.wfchef.recipes.bwa.recipe
   :members:
   :undoc-members:
   :show-inheritance:

wfcommons.wfchef.recipes.cycles.recipe
--------------------------------------

.. automodule:: wfcommons.wfchef.recipes.cycles.recipe
   :members:
   :undoc-members:
   :show-inheritance:

wfcommons.wfchef.recipes.epigenomics.recipe
-------------------------------------------

.. automodule:: wfcommons.wfchef.recipes.epigenomics.recipe
   :members:
   :undoc-members:
   :show-inheritance:

wfcommons.wfchef.recipes.genome.recipe
--------------------------------------

.. automodule:: wfcommons.wfchef.recipes.genome.recipe
   :members:
   :undoc-members:
   :show-inheritance:

wfcommons.wfchef.recipes.montage.recipe
---------------------------------------

.. automodule:: wfcommons.wfchef.recipes.montage.recipe
   :members:
   :undoc-members:
   :show-inheritance:

wfcommons.wfchef.recipes.rnaseq.recipe
--------------------------------------

.. automodule:: wfcommons.wfchef.recipes.rnaseq.recipe
   :members:
   :undoc-members:
   :show-inheritance:

wfcommons.wfchef.recipes.seismology.recipe
------------------------------------------

.. automodule:: wfcommons.wfchef.recipes.seismology.recipe
   :members:
   :undoc-members:
   :show-inheritance:

wfcommons.wfchef.recipes.soykb.recipe
-------------------------------------

.. automodule:: wfcommons.wfchef.recipes.soykb.recipe
   :members:
   :undoc-members:
   :show-inheritance:

wfcommons.wfchef.recipes.srasearch.recipe
-----------------------------------------

.. automodule:: wfcommons.wfchef.recipes.srasearch.recipe
   :members:
   :undoc-members:
   :show-inheritance: